产色氨酸乳酸菌 诱变 饮料成品
色氨酸/乳酸菌诱变选育历史与经典筛选逻辑
这两篇文献都围绕“通过多轮随机诱变并在色氨酸相关条件下筛选/获得过量产L-Trp菌株”的历史发展与方法学脉络展开,强调早期与连续选育策略作为后续优化的基础。
- Early History of the Breeding of Amino Acid-Producing Strains.(S. Nakamori, 2017, Advances in Biochemical Engineering/Biotechnology)
- Development of l-tryptophan production strains by defined genetic modification in Escherichia coli(Zhi-jun Zhao, Chun Zou, Yi-Xing Zhu, J. Dai, Sheng Chen, Dan Wu, Jing Wu, Jian Chen, 2011, Journal of Industrial Microbiology & Biotechnology)
诱变与代谢表型测定:代谢谱/生长特性表征与产物变化
该研究以诱变实验为背景,进一步通过代谢谱与生长特性进行定量表征,关注产酸/代谢物水平以及L-色氨酸等关键代谢物的变化规律,用于解释或验证诱变带来的表型提升。
- Metabolic profiling and growth characteristics of a spaceflight-induced mutant of Lacticaseibacillus rhamnosus: Unveiling enhanced carbohydrate and amino acid metabolism for improved probiotic potential(Shuai Guo, Yue Sun, Ting Wu, L. Kwok, Jicheng Wang, Heping Zhang, 2024, Food Bioscience)
基于营养利用或生长-产物耦联的定向选择(无需传统抗性标记)
该论文提出“碳源利用驱动的选择电路”,把细胞适应度与代谢产物(L-色氨酸)产生耦联,并通过多轮选择降低逃逸风险;同时展示在小型/大型突变库上的突变富集与候选突变鉴定。
- Maltose Utilization as a Novel Selection Strategy for Continuous Evolution of Microbes with Enhanced Metabolite Production.(Shu-de Liu, Yinan Wu, Tian Wang, Chong Zhang, X. Xing, 2017, ACS Synthetic Biology)
感应/传感器驱动的筛选:耦联氨基酸分泌表型与生长信号
该研究构建了生长型传感器菌株检测必需氨基酸(包含与风味相关的氨基酸类物质),并与微滴筛选结合,直接选择“提高氨基酸分泌”的诱变株;其核心是用生物传感把分泌产物表型与可筛选的生长/报告信号耦联起来。
- Enhancement of amino acid production and secretion by Lactococcus lactis using a droplet-based biosensing and selection system(Jhonatan A. Hernandez-Valdes, Myrthe Aan de Stegge, Jos Hermans, J. Teunis, Rinke J. van Tatenhove-Pel, B. Teusink, H. Bachmann, O. Kuipers, 2020, Metabolic Engineering Communications)
随机诱变与代谢工程结合:途径瓶颈解除与协同提升产色氨酸
该论文把随机诱变与代谢工程联用:先用诱变+选择获得高产表型并通过测序定位关键突变(如与香草酸/莽草酸途径相关的调控位点),再在此基础上进行定向过表达以强化代谢通量,从而实现协同增产。
- Combining Random Mutagenesis and Metabolic Engineering for Enhanced Tryptophan Production in Synechocystis sp. Strain PCC 6803(A. Deshpande, Jeremiah Vue, J. Morgan, 2020, Applied and Environmental Microbiology)
乳酸菌对食物诱变性/致突变物相关风险的影响(理论与机制层讨论)
该研究讨论乳酸菌对“食物致突变性”相关物质(如烹饪产物的代谢/致突变相关化合物)在动物组织中的影响,属于与“乳酸菌相关的诱变/致突变”风险评估或理论机制层面的研究,与前述菌株诱变选育属于不同逻辑主线。
- Effects of Lactic Acid Bacteria on the Uptake and Distribution of the Food Mutagen Trp-P-2 in Mice(K. Orrhage, A. Annas, C. Nord, E. Brittebo, J. Rafter, 2002, Scandinavian Journal of Gastroenterology)
这些文献可概括为四条主线并辅以一条风险/理论主线:①以早期多轮随机诱变与色氨酸选择为代表的历史选育框架;②通过代谢谱与生长特性对诱变带来的表型提升进行表征;③利用“生长-产物耦联”的定向选择电路或“传感器-分泌耦联”的微滴筛选来提高筛选效率并降低逃逸;④将随机诱变获得的关键突变与代谢工程相结合,解除途径瓶颈从而协同提升L-色氨酸产量;另有一篇从乳酸菌影响食物致突变风险的角度讨论了乳酸菌与“诱变性”相关的理论背景。
总计7篇相关文献
… mutagenesis experiment. … acid metabolism in R7970 than in Probio-M8. Quantitative analysis confirmed increased levels of lactic acid, citric acid, free amino acids, and tryptophan …
… system that employed lactic acid bacteria, which require amino acids for growth. … producing l-tryptophan was carried out through selection of mutants resistant to various tryptophan …
Amino acids are attractive metabolites for the pharmaceutical and food industry field. On one hand, the construction of microbial cell factories for large-scale production aims to satisfy the demand for amino acids as bulk biochemical. On the other hand, amino acids enhance flavor formation in fermented foods. Concerning the latter, flavor formation in dairy products, such as cheese is associated with the presence of lactic acid bacteria (LAB). In particular, Lactococcus lactis, one of the most important LAB, is used as a starter culture in fermented foods. The proteolytic activity of some L. lactis strains results in peptides and amino acids, which are flavor compounds or flavor precursors. However, it is still a challenge to isolate bacterial cells with enhanced amino acid production and secretion activity. In this work, we developed a growth-based sensor strain to detect the essential amino acids isoleucine, leucine, valine, histidine and methionine. Amino acids are metabolites that can be secreted by some bacteria. Therefore, our biosensor allowed us to identify wild-type L. lactis strains that naturally secrete amino acids, by using co-cultures of the biosensor strain with potential amino acid producing strains. Subsequently, we used this biosensor in combination with a droplet-based screening approach, and isolated three mutated L. lactis IPLA838 strains with 5–10 fold increased amino acid-secretion compared to the wild type. Genome re-sequencing revealed mutations in genes encoding proteins that participate in peptide uptake and peptide degradation. We argue that an unbalance in the regulation of amino acid levels as a result of these gene mutations may drive the accumulation and secretion of these amino acids. This biosensing system tackles the problem of selection for overproduction of secreted molecules, which requires the coupling of the product to the producing cell in the droplets.
We have developed a novel selection circuit based on carbon source utilization that establishes and sustains growth-production coupling over several generations in a medium with maltose as the sole carbon source. In contrast to traditional antibiotic resistance-based circuits, we first proved that coupling of cell fitness to metabolite production by our circuit was more robust with a much lower escape risk even after many rounds of selection. We then applied the selection circuit to the optimization of L-tryptophan (l-Trp) production. We demonstrated that it enriched for specific mutants with increased l-Trp productivity regardless of whether it was applied to a small and defined mutational library or a relatively large and undefined one. From the latter, we identified four novel mutations with enhanced l-Trp output. Finally, we used it to select for several high l-Trp producers with randomly generated genome-wide mutations and obtained strains with up to 65% increased l-Trp production. This selection circuit provides new perspectives for the optimization of microbial cell factories for diverse metabolite production and the discovery of novel genotype-phenotype associations at the single-gene and whole-genome levels.
… food mutagen Trp-P-2 and its metabolites in various tissues of mice supplemented with dietary lactic acid bacteria and would support the theory that cooked food mutagenic compounds …
… mutagenesis and the production of L-Trp … in L-Trp production has been made, the development of L-Trp overproducing strains is all involved in multiple rounds of random mutagenesis [2…
Aromatic amino acids such as tryptophan are primarily used as additives in the animal feed industry and are typically produced using genetically engineered heterotrophic organisms such as Escherichia coli. This involves a two-step process, where the substrate such as molasses is first obtained from plants followed by fermentation by heterotrophic organisms. We have engineered photoautotrophic cyanobacterial strains by a combination of random mutagenesis and metabolic engineering. These strains grow on CO2 as the sole carbon source and utilize light as the sole energy source to produce tryptophan, thus converting the two-step process into a single step. Our results show that combining random mutagenesis and metabolic engineering was superior to either approach alone. This study also builds a foundation for further engineering of cyanobacteria for industrial tryptophan production. ABSTRACT Tryptophan (Trp) is an essential aromatic amino acid that has value as an animal feed supplement, as the amount found in plant-based sources is insufficient. An alternative to production by engineered microbial fermentation is to have tryptophan biosynthesized by a photosynthetic microorganism that could replace or supplement both the plant and industrially used microbes. We selected Synechocystis sp. strain PCC 6803, a model cyanobacterium, as the host and studied metabolic engineering and random mutagenesis approaches. Previous work on engineering heterotrophic microbes for improved Trp titers has targeted allosteric feedback regulation in enzymes 3-deoxy-d-arabinoheptulosonate 7-phosphate synthase (DAHPS) and anthranilate synthase (AS) as major bottlenecks in the shikimate pathway. In this work, the genes encoding feedback-resistant enzymes from Escherichia coli, aroGfbr and trpEfbr, were overexpressed in the host wild-type (WT) strain. Separately, the WT strain was subjected to random mutagenesis and selection using an amino acid analog to isolate tryptophan-overproducing strains. The randomly mutagenized strains were sequenced in order to identify the mutations that resulted in the desirable phenotypes. Interestingly, the tryptophan overproducers had mutations in the gene encoding chorismate mutase (CM), which catalyzes the conversion of chorismate to prephenate. The best tryptophan overproducer from random mutagenesis was selected as a host for metabolic engineering where aroGfbr and trpEfbr were overexpressed. The best strain developed produced 212 ± 23 mg/liter of tryptophan after 10 days of photoautotrophic growth under 3% (vol/vol) CO2. We demonstrated that a combination of random mutagenesis and metabolic engineering was superior to either individual approach. IMPORTANCE Aromatic amino acids such as tryptophan are primarily used as additives in the animal feed industry and are typically produced using genetically engineered heterotrophic organisms such as Escherichia coli. This involves a two-step process, where the substrate such as molasses is first obtained from plants followed by fermentation by heterotrophic organisms. We have engineered photoautotrophic cyanobacterial strains by a combination of random mutagenesis and metabolic engineering. These strains grow on CO2 as the sole carbon source and utilize light as the sole energy source to produce tryptophan, thus converting the two-step process into a single step. Our results show that combining random mutagenesis and metabolic engineering was superior to either approach alone. This study also builds a foundation for further engineering of cyanobacteria for industrial tryptophan production.
这些文献可概括为四条主线并辅以一条风险/理论主线:①以早期多轮随机诱变与色氨酸选择为代表的历史选育框架;②通过代谢谱与生长特性对诱变带来的表型提升进行表征;③利用“生长-产物耦联”的定向选择电路或“传感器-分泌耦联”的微滴筛选来提高筛选效率并降低逃逸;④将随机诱变获得的关键突变与代谢工程相结合,解除途径瓶颈从而协同提升L-色氨酸产量;另有一篇从乳酸菌影响食物致突变风险的角度讨论了乳酸菌与“诱变性”相关的理论背景。